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This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters. Learn more about bidirectional Unicode charactersOriginal file line number Diff line number Diff line change @@ -0,0 +1,3 @@ ## REF https://machinelearningmastery.com/multivariate-time-series-forecasting-lstms-keras/ https://archive.ics.uci.edu/ml/datasets/Beijing+PM2.5+Data This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters. Learn more about bidirectional Unicode charactersOriginal file line number Diff line number Diff line change @@ -0,0 +1,40 @@ from pandas import read_csv from datetime import datetime def parse(x): return datetime.strptime(x, '%Y %m %d %H') dataset = read_csv('raw.csv', parse_dates=[['year', 'month', 'day', 'hour',]], index_col=0, date_parser=parse) dataset.drop('No', axis=1, inplace=True) dataset.columns = ['pollution', 'dew', 'temp', 'press', 'wnd_dir', 'wnd_spd', 'snow', 'rain'] dataset.index.name = 'date' dataset['pollution'].fillna(0, inplace=True) dataset = dataset[24:] print(dataset.head(5)) dataset.to_csv('pollution.csv') """ from pandas import read_csv from datetime import datetime # load data def parse(x): return datetime.strptime(x, '%Y %m %d %H') dataset = read_csv('raw.csv', parse_dates = [['year', 'month', 'day', 'hour']], index_col=0, date_parser=parse) dataset.drop('No', axis=1, inplace=True) # manually specify column names dataset.columns = ['pollution', 'dew', 'temp', 'press', 'wnd_dir', 'wnd_spd', 'snow', 'rain'] dataset.index.name = 'date' # mark all NA values with 0 dataset['pollution'].fillna(0, inplace=True) # drop the first 24 hours dataset = dataset[24:] # summarize first 5 rows print(dataset.head(5)) # save to file dataset.to_csv('pollution.csv') """ # vim:ts=2 sts=2 ai sw=2 expandtab This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. 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Learn more about bidirectional Unicode charactersOriginal file line number Diff line number Diff line change @@ -0,0 +1,36 @@ from pandas import DataFrame from pandas import concat def series_to_supervised(data, n_in=1, n_out=1, dropnan=True): n_var = 1 if type(data) is list else data.shape[1] df = DataFrame(data) cols, names = list(), list() for i in range(n_in, 0, -1): cols.append(df.shift(i)) names += [('var%d(t-%d)' % (j + 1, i)) for j in range(n_vars)] for i in range(0, n_out): cols.append(df.shift(-i)) if i == 0: names += [('var%d(t)' % (j + 1)) for j in range(n_vars)] else: names += [('var%d(t+%d)' %(j + 1, i)) for j in range(n_vars)] agg = concat(cols, axis=1) if dropnan: agg.dropnan(inplace=True) return dropnan dataset = read_csv('pollution.csv', header=0, index_col=0) values = dataset.values encoder = LabelEncoder() values[:,4] = encoder.fit_transform(values[:,4]) values = values.astype('float32') scalar = MinMaxScalar(feature_range(0, 1)) scaled = scalar.fit_transform(values) reframed = series_to_supervised(scaled, 1, 1) reframed.drop(reframed.columns[[9,10,11,12,13,14,15]], axis=1, inplace=True) print(reframed.head(5)) # vim: ts=2 sts=2 sw=2 expandtab ai This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. 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Learn more about bidirectional Unicode charactersOriginal file line number Diff line number Diff line change @@ -0,0 +1,98 @@ from math import sqrt from numpy import concatenate from matplotlib import pyplot from pandas import read_csv from pandas import DataFrame from pandas import concat from sklearn.preprocessing import MinMaxScaler from sklearn.preprocessing import LabelEncoder from sklearn.metrics import mean_squared_error from keras.models import Sequential from keras.layers import Dense from keras.layers import LSTM # convert series to supervised learning def series_to_supervised(data, n_in=1, n_out=1, dropnan=True): n_vars = 1 if type(data) is list else data.shape[1] df = DataFrame(data) cols, names = list(), list() # input sequence (t-n, ... t-1) for i in range(n_in, 0, -1): cols.append(df.shift(i)) names += [('var%d(t-%d)' % (j+1, i)) for j in range(n_vars)] # forecast sequence (t, t+1, ... t+n) for i in range(0, n_out): cols.append(df.shift(-i)) if i == 0: names += [('var%d(t)' % (j+1)) for j in range(n_vars)] else: names += [('var%d(t+%d)' % (j+1, i)) for j in range(n_vars)] # put it all together agg = concat(cols, axis=1) agg.columns = names # drop rows with NaN values if dropnan: agg.dropna(inplace=True) return agg # load dataset dataset = read_csv('pollution.csv', header=0, index_col=0) values = dataset.values # integer encode direction encoder = LabelEncoder() values[:,4] = encoder.fit_transform(values[:,4]) # ensure all data is float values = values.astype('float32') # normalize features scaler = MinMaxScaler(feature_range=(0, 1)) scaled = scaler.fit_transform(values) # specify the number of lag hours n_hours = 3 n_features = 8 # frame as supervised learning reframed = series_to_supervised(scaled, n_hours, 1) print(reframed.shape) # split into train and test sets values = reframed.values n_train_hours = 365 * 24 train = values[:n_train_hours, :] test = values[n_train_hours:, :] # split into input and outputs n_obs = n_hours * n_features train_X, train_y = train[:, :n_obs], train[:, -n_features] test_X, test_y = test[:, :n_obs], test[:, -n_features] print(train_X.shape, len(train_X), train_y.shape) # reshape input to be 3D [samples, timesteps, features] train_X = train_X.reshape((train_X.shape[0], n_hours, n_features)) test_X = test_X.reshape((test_X.shape[0], n_hours, n_features)) print(train_X.shape, train_y.shape, test_X.shape, test_y.shape) # design network model = Sequential() model.add(LSTM(50, input_shape=(train_X.shape[1], train_X.shape[2]))) model.add(Dense(1)) model.compile(loss='mae', optimizer='adam') # fit network history = model.fit(train_X, train_y, epochs=50, batch_size=72, validation_data=(test_X, test_y), verbose=2, shuffle=False) # plot history pyplot.plot(history.history['loss'], label='train') pyplot.plot(history.history['val_loss'], label='test') pyplot.legend() pyplot.show() # make a prediction yhat = model.predict(test_X) test_X = test_X.reshape((test_X.shape[0], n_hours*n_features)) # invert scaling for forecast inv_yhat = concatenate((yhat, test_X[:, -7:]), axis=1) inv_yhat = scaler.inverse_transform(inv_yhat) inv_yhat = inv_yhat[:,0] # invert scaling for actual test_y = test_y.reshape((len(test_y), 1)) inv_y = concatenate((test_y, test_X[:, -7:]), axis=1) inv_y = scaler.inverse_transform(inv_y) inv_y = inv_y[:,0] # calculate RMSE rmse = sqrt(mean_squared_error(inv_y, inv_yhat)) print('Test RMSE: %.3f' % rmse) This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. 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Learn more about bidirectional Unicode charactersOriginal file line number Diff line number Diff line change @@ -0,0 +1,98 @@ from math import sqrt from numpy import concatenate from matplotlib import pyplot from pandas import read_csv from pandas import DataFrame from pandas import concat from sklearn.preprocessing import MinMaxScaler from sklearn.preprocessing import LabelEncoder from sklearn.metrics import mean_squared_error from keras.models import Sequential from keras.layers import Dense from keras.layers import LSTM # convert series to supervised learning def series_to_supervised(data, n_in=1, n_out=1, dropnan=True): n_vars = 1 if type(data) is list else data.shape[1] df = DataFrame(data) cols, names = list(), list() # input sequence (t-n, ... t-1) for i in range(n_in, 0, -1): cols.append(df.shift(i)) names += [('var%d(t-%d)' % (j+1, i)) for j in range(n_vars)] # forecast sequence (t, t+1, ... t+n) for i in range(0, n_out): cols.append(df.shift(-i)) if i == 0: names += [('var%d(t)' % (j+1)) for j in range(n_vars)] else: names += [('var%d(t+%d)' % (j+1, i)) for j in range(n_vars)] # put it all together agg = concat(cols, axis=1) agg.columns = names # drop rows with NaN values if dropnan: agg.dropna(inplace=True) return agg # load dataset dataset = read_csv('pollution.csv', header=0, index_col=0) values = dataset.values # integer encode direction encoder = LabelEncoder() values[:,4] = encoder.fit_transform(values[:,4]) # ensure all data is float values = values.astype('float32') # normalize features scaler = MinMaxScaler(feature_range=(0, 1)) scaled = scaler.fit_transform(values) # specify the number of lag hours n_hours = 3 n_features = 8 # frame as supervised learning reframed = series_to_supervised(scaled, n_hours, 1) print(reframed.shape) # split into train and test sets values = reframed.values n_train_hours = 365 * 24 train = values[:n_train_hours, :] test = values[n_train_hours:, :] # split into input and outputs n_obs = n_hours * n_features train_X, train_y = train[:, :n_obs], train[:, -n_features] test_X, test_y = test[:, :n_obs], test[:, -n_features] print(train_X.shape, len(train_X), train_y.shape) # reshape input to be 3D [samples, timesteps, features] train_X = train_X.reshape((train_X.shape[0], n_hours, n_features)) test_X = test_X.reshape((test_X.shape[0], n_hours, n_features)) print(train_X.shape, train_y.shape, test_X.shape, test_y.shape) # design network model = Sequential() model.add(LSTM(50, input_shape=(train_X.shape[1], train_X.shape[2]))) model.add(Dense(1)) model.compile(loss='mae', optimizer='adam') # fit network history = model.fit(train_X, train_y, epochs=50, batch_size=72, validation_data=(test_X, test_y), verbose=2, shuffle=False) # plot history pyplot.plot(history.history['loss'], label='train') pyplot.plot(history.history['val_loss'], label='test') pyplot.legend() pyplot.show() # make a prediction yhat = model.predict(test_X) test_X = test_X.reshape((test_X.shape[0], n_hours*n_features)) # invert scaling for forecast inv_yhat = concatenate((yhat, test_X[:, -7:]), axis=1) inv_yhat = scaler.inverse_transform(inv_yhat) inv_yhat = inv_yhat[:,0] # invert scaling for actual test_y = test_y.reshape((len(test_y), 1)) inv_y = concatenate((test_y, test_X[:, -7:]), axis=1) inv_y = scaler.inverse_transform(inv_y) inv_y = inv_y[:,0] # calculate RMSE rmse = sqrt(mean_squared_error(inv_y, inv_yhat)) print('Test RMSE: %.3f' % rmse)