David O'Connor dhoconno
dhoconno
/ auto-faculty-profile.py
Last active
October 2, 2023 01:38
— forked from corneliusroemer/auto-faculty-profile.py
Automatically generate faculty profiles using pubmed abstracts and GPT-4, filtering papers for relevance based on author position
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| import argparse | |
| from Bio import Entrez | |
| import openai | |
| import time | |
| def search_latest_papers(faculty_id, affiliation, num_papers=25): | |
| papers_info = [] | |
| Entrez.email = "[email protected]" | |
| handle = Entrez.esearch( | |
| db="pubmed", |
dhoconno
/ auto-faculty-profile.py
Last active
September 26, 2023 02:02
— forked from corneliusroemer/auto-faculty-profile.py
Automatically generate faculty profiles using pubmed abstracts and GPT-4
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| import argparse | |
| from math import e | |
| from Bio import Entrez | |
| import openai | |
| ## modified to return succinct summaries of five most recent papers | |
| ## todo: avoid stilted language construct while preserving key points | |
| def search_latest_papers(faculty_name, affiliation, source="Pubmed", num_papers=5): | |
| abstracts = [] |