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@andy-thomason
andy-thomason / Genomics_A_Programmers_Guide.md
Created May 14, 2019 13:32
Genomics a programmers introduction

Genomics - A programmer's guide.

Andy Thomason is a Senior Programmer at Genomics PLC. He has been witing graphics systems, games and compilers since the '70s and specialises in code performance.

https://www.genomicsplc.com

@gmgitx
gmgitx / gist:4e178f79f98e06c81423b763546a738d
Created August 31, 2018 17:22 — forked from CristinaSolana/gist:1885435
Keeping a fork up to date

1. Clone your fork:

git clone [email protected]:YOUR-USERNAME/YOUR-FORKED-REPO.git

2. Add remote from original repository in your forked repository:

cd into/cloned/fork-repo
git remote add upstream git://github.com/ORIGINAL-DEV-USERNAME/REPO-YOU-FORKED-FROM.git
git fetch upstream
@stephenturner
stephenturner / deseq2-analysis-template.R
Created July 30, 2014 12:20
Template for analysis with DESeq2
## RNA-seq analysis with DESeq2
## Stephen Turner, @genetics_blog
# RNA-seq data from GSE52202
# http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=gse52202. All patients with
# ALS, 4 with C9 expansion ("exp"), 4 controls without expansion ("ctl")
# Import & pre-process ----------------------------------------------------
# Import data from featureCounts
@ryin
ryin / tmux_local_install.sh
Last active May 27, 2025 08:36
bash script for installing tmux without root access
#!/bin/bash
# Script for installing tmux on systems where you don't have root access.
# tmux will be installed in $HOME/local/bin.
# It's assumed that wget and a C/C++ compiler are installed.
# exit on error
set -e
TMUX_VERSION=1.8