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November 13, 2021 03:36
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| R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out" | |
| Copyright (C) 2020 The R Foundation for Statistical Computing | |
| Platform: x86_64-apple-darwin17.0 (64-bit) | |
| R is free software and comes with ABSOLUTELY NO WARRANTY. | |
| You are welcome to redistribute it under certain conditions. | |
| Type 'license()' or 'licence()' for distribution details. | |
| Natural language support but running in an English locale | |
| R is a collaborative project with many contributors. | |
| Type 'contributors()' for more information and | |
| 'citation()' on how to cite R or R packages in publications. | |
| Type 'demo()' for some demos, 'help()' for on-line help, or | |
| 'help.start()' for an HTML browser interface to help. | |
| Type 'q()' to quit R. | |
| # Bootstrapping renv 0.14.0 -------------------------------------------------- | |
| * Downloading renv 0.14.0 ... OK (downloaded binary) | |
| * Installing renv 0.14.0 ... Done! | |
| * Successfully installed and loaded renv 0.14.0. | |
| * Project '~/Documents/GitHub/TCC-GUI' loaded. [renv 0.14.0] | |
| * The project library is out of sync with the lockfile. | |
| * Use `renv::restore()` to install packages recorded in the lockfile. | |
| > renv::restore() | |
| The following package(s) will be updated: | |
| # Bioconductor ======================= | |
| - AnnotationDbi [* -> 1.52.0] | |
| - Biobase [* -> 2.50.0] | |
| - BiocGenerics [* -> 0.36.1] | |
| - BiocParallel [* -> 1.24.1] | |
| - DESeq2 [* -> 1.30.1] | |
| - DelayedArray [* -> 0.16.3] | |
| - GenomeInfoDb [* -> 1.26.7] | |
| - GenomeInfoDbData [* -> 1.2.4] | |
| - GenomicRanges [* -> 1.42.0] | |
| - IRanges [* -> 2.24.1] | |
| - MatrixGenerics [* -> 1.2.1] | |
| - ROC [* -> 1.66.0] | |
| - S4Vectors [* -> 0.28.1] | |
| - SummarizedExperiment [* -> 1.20.0] | |
| - TCC [* -> 1.30.0] | |
| - XVector [* -> 0.30.0] | |
| - annotate [* -> 1.68.0] | |
| - baySeq [* -> 2.24.0] | |
| - edgeR [* -> 3.32.1] | |
| - genefilter [* -> 1.72.1] | |
| - geneplotter [* -> 1.68.0] | |
| - limma [* -> 3.46.0] | |
| - zlibbioc [* -> 1.36.0] | |
| # CRAN =============================== | |
| - MASS [7.3-53 -> 7.3-54] | |
| - cluster [2.1.0 -> 2.1.2] | |
| - lattice [0.20-41 -> 0.20-44] | |
| - mgcv [1.8-33 -> 1.8-36] | |
| - nlme [3.1-151 -> 3.1-153] | |
| - survival [3.2-7 -> 3.2-13] | |
| - BH [* -> 1.75.0-0] | |
| - BiocManager [* -> 1.30.16] | |
| - DBI [* -> 1.1.1] | |
| - DT [* -> 0.19] | |
| - R6 [* -> 2.5.1] | |
| - RColorBrewer [* -> 1.1-2] | |
| - RCurl [* -> 1.98-1.5] | |
| - RSQLite [* -> 2.2.8] | |
| - Rcpp [* -> 1.0.7] | |
| - RcppArmadillo [* -> 0.10.6.0.0] | |
| - TSP [* -> 1.1-10] | |
| - XML [* -> 3.99-0.8] | |
| - abind [* -> 1.4-5] | |
| - askpass [* -> 1.1] | |
| - assertthat [* -> 0.2.1] | |
| - base64enc [* -> 0.1-3] | |
| - bit [* -> 4.0.4] | |
| - bit64 [* -> 4.0.5] | |
| - bitops [* -> 1.0-7] | |
| - blob [* -> 1.2.2] | |
| - bslib [* -> 0.3.0] | |
| - cachem [* -> 1.0.6] | |
| - callr [* -> 3.7.0] | |
| - cli [* -> 3.0.1] | |
| - colorspace [* -> 2.0-2] | |
| - commonmark [* -> 1.7] | |
| - cpp11 [* -> 0.3.1] | |
| - crayon [* -> 1.4.1] | |
| - crosstalk [* -> 1.1.1] | |
| - curl [* -> 4.3.2] | |
| - data.table [* -> 1.14.0] | |
| - dendextend [* -> 1.15.1] | |
| - digest [* -> 0.6.27] | |
| - dplyr [* -> 1.0.7] | |
| - egg [* -> 0.4.5] | |
| - ellipsis [* -> 0.3.2] | |
| - evaluate [* -> 0.14] | |
| - fansi [* -> 0.5.0] | |
| - farver [* -> 2.1.0] | |
| - fastmap [* -> 1.1.0] | |
| - foreach [* -> 1.5.1] | |
| - formatR [* -> 1.11] | |
| - fs [* -> 1.5.0] | |
| - futile.logger [* -> 1.4.3] | |
| - futile.options [* -> 1.0.1] | |
| - gclus [* -> 1.3.2] | |
| - generics [* -> 0.1.0] | |
| - ggplot2 [* -> 3.3.5] | |
| - glue [* -> 1.4.2] | |
| - gridExtra [* -> 2.3] | |
| - gtable [* -> 0.3.0] | |
| - heatmaply [* -> 1.2.1] | |
| - highr [* -> 0.9] | |
| - htmltools [* -> 0.5.2] | |
| - htmlwidgets [* -> 1.5.4] | |
| - httpuv [* -> 1.6.3] | |
| - httr [* -> 1.4.2] | |
| - isoband [* -> 0.2.5] | |
| - iterators [* -> 1.0.13] | |
| - jquerylib [* -> 0.1.4] | |
| - jsonlite [* -> 1.7.2] | |
| - knitr [* -> 1.34] | |
| - labeling [* -> 0.4.2] | |
| - lambda.r [* -> 1.2.4] | |
| - later [* -> 1.3.0] | |
| - lazyeval [* -> 0.2.2] | |
| - lifecycle [* -> 1.0.0] | |
| - locfit [* -> 1.5-9.4] | |
| - magrittr [* -> 2.0.1] | |
| - markdown [* -> 1.1] | |
| - matrixStats [* -> 0.61.0] | |
| - memoise [* -> 2.0.0] | |
| - mime [* -> 0.11] | |
| - munsell [* -> 0.5.0] | |
| - openssl [* -> 1.4.5] | |
| - packrat [* -> 0.7.0] | |
| - pillar [* -> 1.6.2] | |
| - pkgconfig [* -> 2.0.3] | |
| - plogr [* -> 0.2.0] | |
| - plotly [* -> 4.9.4.1] | |
| - plyr [* -> 1.8.6] | |
| - processx [* -> 3.5.2] | |
| - promises [* -> 1.2.0.1] | |
| - ps [* -> 1.6.0] | |
| - purrr [* -> 0.3.4] | |
| - qap [* -> 0.1-1] | |
| - rappdirs [* -> 0.3.3] | |
| - registry [* -> 0.5-1] | |
| - reshape2 [* -> 1.4.4] | |
| - rlang [* -> 0.4.11] | |
| - rmarkdown [* -> 2.11] | |
| - rsconnect [* -> 0.8.24] | |
| - rstudioapi [* -> 0.13] | |
| - sass [* -> 0.4.0] | |
| - scales [* -> 1.1.1] | |
| - seriation [* -> 1.3.0] | |
| - shiny [* -> 1.6.0] | |
| - shinyBS [* -> 0.61] | |
| - shinyWidgets [* -> 0.6.2] | |
| - shinycssloaders [* -> 1.0.0] | |
| - shinydashboard [* -> 0.7.1] | |
| - snow [* -> 0.4-3] | |
| - sourcetools [* -> 0.1.7] | |
| - stringi [* -> 1.7.4] | |
| - stringr [* -> 1.4.0] | |
| - sys [* -> 3.4] | |
| - tibble [* -> 3.1.4] | |
| - tidyr [* -> 1.1.3] | |
| - tidyselect [* -> 1.1.1] | |
| - tinytex [* -> 0.33] | |
| - utf8 [* -> 1.2.2] | |
| - vctrs [* -> 0.3.8] | |
| - viridis [* -> 0.6.1] | |
| - viridisLite [* -> 0.4.0] | |
| - webshot [* -> 0.5.2] | |
| - withr [* -> 2.4.2] | |
| - xfun [* -> 0.26] | |
| - xtable [* -> 1.8-4] | |
| - yaml [* -> 2.2.1] | |
| Do you want to proceed? [y/N]: y | |
| Installing BiocManager [1.30.16] ... | |
| OK [linked cache] | |
| Installing cluster [2.1.2] ... | |
| OK [linked cache] | |
| Installing lattice [0.20-44] ... | |
| OK [linked cache] | |
| Installing MASS [7.3-54] ... | |
| OK [linked cache] | |
| Installing nlme [3.1-153] ... | |
| OK [linked cache] | |
| Installing mgcv [1.8-36] ... | |
| OK [linked cache] | |
| Installing survival [3.2-13] ... | |
| OK [linked cache] | |
| Installing DBI [1.1.1] ... | |
| OK [linked cache] | |
| Installing bit [4.0.4] ... | |
| OK [linked cache] | |
| Installing bit64 [4.0.5] ... | |
| OK [linked cache] | |
| Installing rlang [0.4.11] ... | |
| OK [linked cache] | |
| Installing ellipsis [0.3.2] ... | |
| OK [linked cache] | |
| Installing glue [1.4.2] ... | |
| OK [linked cache] | |
| Installing vctrs [0.3.8] ... | |
| OK [linked cache] | |
| Installing blob [1.2.2] ... | |
| OK [linked cache] | |
| Installing fastmap [1.1.0] ... | |
| OK [linked cache] | |
| Installing cachem [1.0.6] ... | |
| OK [linked cache] | |
| Installing memoise [2.0.0] ... | |
| OK [linked cache] | |
| Installing pkgconfig [2.0.3] ... | |
| OK [linked cache] | |
| Installing Rcpp [1.0.7] ... | |
| OK [linked cache] | |
| Installing plogr [0.2.0] ... | |
| OK [linked cache] | |
| Installing RSQLite [2.2.8] ... | |
| OK [linked cache] | |
| Installing BiocGenerics [0.36.1] ... | |
| OK [linked cache] | |
| Installing S4Vectors [0.28.1] ... | |
| OK [linked cache] | |
| Installing Biobase [2.50.0] ... | |
| OK [linked cache] | |
| Installing IRanges [2.24.1] ... | |
| OK [linked cache] | |
| Installing AnnotationDbi [1.52.0] ... | |
| OK [linked cache] | |
| Installing BH [1.75.0-0] ... | |
| OK [linked cache] | |
| Installing BiocManager [1.30.16] ... | |
| OK [linked cache] | |
| Installing formatR [1.11] ... | |
| OK [linked cache] | |
| Installing lambda.r [1.2.4] ... | |
| OK [linked cache] | |
| Installing futile.options [1.0.1] ... | |
| OK [linked cache] | |
| Installing futile.logger [1.4.3] ... | |
| OK [linked cache] | |
| Installing snow [0.4-3] ... | |
| OK [linked cache] | |
| Installing BiocParallel [1.24.1] ... | |
| OK [linked cache] | |
| Installing xtable [1.8-4] ... | |
| OK [linked cache] | |
| Installing curl [4.3.2] ... | |
| OK [linked cache] | |
| Installing jsonlite [1.7.2] ... | |
| OK [linked cache] | |
| Installing mime [0.11] ... | |
| OK [linked cache] | |
| Installing sys [3.4] ... | |
| OK [linked cache] | |
| Installing askpass [1.1] ... | |
| OK [linked cache] | |
| Installing openssl [1.4.5] ... | |
| OK [linked cache] | |
| Installing R6 [2.5.1] ... | |
| OK [linked cache] | |
| Installing httr [1.4.2] ... | |
| OK [linked cache] | |
| Installing XML [3.99-0.8] ... | |
| OK [linked cache] | |
| Installing annotate [1.68.0] ... | |
| OK [linked cache] | |
| Installing genefilter [1.72.1] ... | |
| OK [linked cache] | |
| Installing locfit [1.5-9.4] ... | |
| OK [linked cache] | |
| Installing RColorBrewer [1.1-2] ... | |
| OK [linked cache] | |
| Installing geneplotter [1.68.0] ... | |
| OK [linked cache] | |
| Installing digest [0.6.27] ... | |
| OK [linked cache] | |
| Installing gtable [0.3.0] ... | |
| OK [linked cache] | |
| Installing isoband [0.2.5] ... | |
| OK [linked cache] | |
| Installing farver [2.1.0] ... | |
| OK [linked cache] | |
| Installing labeling [0.4.2] ... | |
| OK [linked cache] | |
| Installing lifecycle [1.0.0] ... | |
| OK [linked cache] | |
| Installing colorspace [2.0-2] ... | |
| OK [linked cache] | |
| Installing munsell [0.5.0] ... | |
| OK [linked cache] | |
| Installing viridisLite [0.4.0] ... | |
| OK [linked cache] | |
| Installing scales [1.1.1] ... | |
| OK [linked cache] | |
| Installing fansi [0.5.0] ... | |
| OK [linked cache] | |
| Installing magrittr [2.0.1] ... | |
| OK [linked cache] | |
| Installing cli [3.0.1] ... | |
| OK [linked cache] | |
| Installing crayon [1.4.1] ... | |
| OK [linked cache] | |
| Installing utf8 [1.2.2] ... | |
| OK [linked cache] | |
| Installing pillar [1.6.2] ... | |
| OK [linked cache] | |
| Installing tibble [3.1.4] ... | |
| OK [linked cache] | |
| Installing withr [2.4.2] ... | |
| OK [linked cache] | |
| Installing ggplot2 [3.3.5] ... | |
| OK [linked cache] | |
| Installing zlibbioc [1.36.0] ... | |
| OK [linked cache] | |
| Installing XVector [0.30.0] ... | |
| OK [linked cache] | |
| Installing bitops [1.0-7] ... | |
| OK [linked cache] | |
| Installing RCurl [1.98-1.5] ... | |
| OK [linked cache] | |
| Installing GenomeInfoDbData [1.2.4] ... | |
| OK [linked cache] | |
| Installing GenomeInfoDb [1.26.7] ... | |
| OK [linked cache] | |
| Installing GenomicRanges [1.42.0] ... | |
| OK [linked cache] | |
| Installing matrixStats [0.61.0] ... | |
| OK [linked cache] | |
| Installing MatrixGenerics [1.2.1] ... | |
| OK [linked cache] | |
| Installing DelayedArray [0.16.3] ... | |
| OK [linked cache] | |
| Installing SummarizedExperiment [1.20.0] ... | |
| OK [linked cache] | |
| Installing RcppArmadillo [0.10.6.0.0] ... | |
| OK [linked cache] | |
| Installing DESeq2 [1.30.1] ... | |
| OK [linked cache] | |
| Installing base64enc [0.1-3] ... | |
| OK [linked cache] | |
| Installing htmltools [0.5.2] ... | |
| OK [linked cache] | |
| Installing yaml [2.2.1] ... | |
| OK [linked cache] | |
| Installing htmlwidgets [1.5.4] ... | |
| OK [linked cache] | |
| Installing lazyeval [0.2.2] ... | |
| OK [linked cache] | |
| Installing crosstalk [1.1.1] ... | |
| OK [linked cache] | |
| Installing jquerylib [0.1.4] ... | |
| OK [linked cache] | |
| Installing later [1.3.0] ... | |
| OK [linked cache] | |
| Installing promises [1.2.0.1] ... | |
| OK [linked cache] | |
| Installing DT [0.19] ... | |
| OK [linked cache] | |
| Installing evaluate [0.14] ... | |
| OK [linked cache] | |
| Installing xfun [0.26] ... | |
| OK [linked cache] | |
| Installing highr [0.9] ... | |
| OK [linked cache] | |
| Installing stringi [1.7.4] ... | |
| OK [linked cache] | |
| Installing stringr [1.4.0] ... | |
| OK [linked cache] | |
| Installing knitr [1.34] ... | |
| OK [linked cache] | |
| Installing ROC [1.66.0] ... | |
| OK [linked cache] | |
| Installing limma [3.46.0] ... | |
| OK [linked cache] | |
| Installing edgeR [3.32.1] ... | |
| OK [linked cache] | |
| Installing abind [1.4-5] ... | |
| OK [linked cache] | |
| Installing baySeq [2.24.0] ... | |
| OK [linked cache] | |
| Installing TCC [1.30.0] ... | |
| OK [linked cache] | |
| Installing iterators [1.0.13] ... | |
| OK [linked cache] | |
| Installing foreach [1.5.1] ... | |
| OK [linked cache] | |
| Installing TSP [1.1-10] ... | |
| OK [linked cache] | |
| Installing assertthat [0.2.1] ... | |
| OK [linked cache] | |
| Installing fs [1.5.0] ... | |
| OK [linked cache] | |
| Installing rappdirs [0.3.3] ... | |
| OK [linked cache] | |
| Installing sass [0.4.0] ... | |
| OK [linked cache] | |
| Installing bslib [0.3.0] ... | |
| OK [linked cache] | |
| Installing ps [1.6.0] ... | |
| OK [linked cache] | |
| Installing processx [3.5.2] ... | |
| OK [linked cache] | |
| Installing callr [3.7.0] ... | |
| OK [linked cache] | |
| Installing commonmark [1.7] ... | |
| OK [linked cache] | |
| Installing cpp11 [0.3.1] ... | |
| OK [linked cache] | |
| Installing data.table [1.14.0] ... | |
| OK [linked cache] | |
| Installing gridExtra [2.3] ... | |
| OK [linked cache] | |
| Installing viridis [0.6.1] ... | |
| OK [linked cache] | |
| Installing dendextend [1.15.1] ... | |
| OK [linked cache] | |
| Installing generics [0.1.0] ... | |
| OK [linked cache] | |
| Installing purrr [0.3.4] ... | |
| OK [linked cache] | |
| Installing tidyselect [1.1.1] ... | |
| OK [linked cache] | |
| Installing dplyr [1.0.7] ... | |
| OK [linked cache] | |
| Installing egg [0.4.5] ... | |
| OK [linked cache] | |
| Installing gclus [1.3.2] ... | |
| OK [linked cache] | |
| Installing plyr [1.8.6] ... | |
| OK [linked cache] | |
| Installing reshape2 [1.4.4] ... | |
| OK [linked cache] | |
| Installing qap [0.1-1] ... | |
| OK [linked cache] | |
| Installing registry [0.5-1] ... | |
| OK [linked cache] | |
| Installing seriation [1.3.0] ... | |
| OK [linked cache] | |
| Installing webshot [0.5.2] ... | |
| OK [linked cache] | |
| Installing tidyr [1.1.3] ... | |
| OK [linked cache] | |
| Installing plotly [4.9.4.1] ... | |
| OK [linked cache] | |
| Installing heatmaply [1.2.1] ... | |
| OK [linked cache] | |
| Installing httpuv [1.6.3] ... | |
| OK [linked cache] | |
| Installing markdown [1.1] ... | |
| OK [linked cache] | |
| Installing packrat [0.7.0] ... | |
| OK [linked cache] | |
| Installing tinytex [0.33] ... | |
| OK [linked cache] | |
| Installing rmarkdown [2.11] ... | |
| OK [linked cache] | |
| Installing rstudioapi [0.13] ... | |
| OK [linked cache] | |
| Installing rsconnect [0.8.24] ... | |
| OK [linked cache] | |
| Installing sourcetools [0.1.7] ... | |
| OK [linked cache] | |
| Installing shiny [1.6.0] ... | |
| OK [linked cache] | |
| Installing shinyBS [0.61] ... | |
| OK [linked cache] | |
| Installing shinyWidgets [0.6.2] ... | |
| OK [linked cache] | |
| Installing shinycssloaders [1.0.0] ... | |
| OK [linked cache] | |
| Installing shinydashboard [0.7.1] ... | |
| OK [linked cache] | |
| > shiny::runApp('TCC-GUI') | |
| Loading required package: shiny | |
| Attaching package: ‘shinydashboard’ | |
| The following object is masked from ‘package:graphics’: | |
| box | |
| Loading required package: ggplot2 | |
| Attaching package: ‘plotly’ | |
| The following object is masked from ‘package:ggplot2’: | |
| last_plot | |
| The following object is masked from ‘package:stats’: | |
| filter | |
| The following object is masked from ‘package:graphics’: | |
| layout | |
| Attaching package: ‘dplyr’ | |
| The following objects are masked from ‘package:stats’: | |
| filter, lag | |
| The following objects are masked from ‘package:base’: | |
| intersect, setdiff, setequal, union | |
| Loading required package: DESeq2 | |
| Loading required package: S4Vectors | |
| Loading required package: stats4 | |
| Loading required package: BiocGenerics | |
| Warning: package ‘BiocGenerics’ was built under R version 4.0.5 | |
| Loading required package: parallel | |
| Attaching package: ‘BiocGenerics’ | |
| The following objects are masked from ‘package:parallel’: | |
| clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport, clusterMap, | |
| parApply, parCapply, parLapply, parLapplyLB, parRapply, parSapply, parSapplyLB | |
| The following objects are masked from ‘package:dplyr’: | |
| combine, intersect, setdiff, union | |
| The following objects are masked from ‘package:stats’: | |
| IQR, mad, sd, var, xtabs | |
| The following objects are masked from ‘package:base’: | |
| anyDuplicated, append, as.data.frame, basename, cbind, colnames, dirname, do.call, | |
| duplicated, eval, evalq, Filter, Find, get, grep, grepl, intersect, is.unsorted, | |
| lapply, Map, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, | |
| Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, table, tapply, | |
| union, unique, unsplit, which.max, which.min | |
| Attaching package: ‘S4Vectors’ | |
| The following objects are masked from ‘package:dplyr’: | |
| first, rename | |
| The following object is masked from ‘package:plotly’: | |
| rename | |
| The following object is masked from ‘package:base’: | |
| expand.grid | |
| Loading required package: IRanges | |
| Attaching package: ‘IRanges’ | |
| The following objects are masked from ‘package:dplyr’: | |
| collapse, desc, slice | |
| The following object is masked from ‘package:plotly’: | |
| slice | |
| Loading required package: GenomicRanges | |
| Loading required package: GenomeInfoDb | |
| Warning: package ‘GenomeInfoDb’ was built under R version 4.0.5 | |
| Loading required package: SummarizedExperiment | |
| Loading required package: MatrixGenerics | |
| Loading required package: matrixStats | |
| Attaching package: ‘matrixStats’ | |
| The following object is masked from ‘package:dplyr’: | |
| count | |
| Attaching package: ‘MatrixGenerics’ | |
| The following objects are masked from ‘package:matrixStats’: | |
| colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, colCounts, colCummaxs, | |
| colCummins, colCumprods, colCumsums, colDiffs, colIQRDiffs, colIQRs, colLogSumExps, | |
| colMadDiffs, colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, | |
| colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, colSums2, | |
| colTabulates, colVarDiffs, colVars, colWeightedMads, colWeightedMeans, | |
| colWeightedMedians, colWeightedSds, colWeightedVars, rowAlls, rowAnyNAs, rowAnys, | |
| rowAvgsPerColSet, rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, | |
| rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, rowMadDiffs, rowMads, | |
| rowMaxs, rowMeans2, rowMedians, rowMins, rowOrderStats, rowProds, rowQuantiles, | |
| rowRanges, rowRanks, rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, | |
| rowVars, rowWeightedMads, rowWeightedMeans, rowWeightedMedians, rowWeightedSds, | |
| rowWeightedVars | |
| Loading required package: Biobase | |
| Welcome to Bioconductor | |
| Vignettes contain introductory material; view with 'browseVignettes()'. To cite | |
| Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. | |
| Attaching package: ‘Biobase’ | |
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| Loading required package: edgeR | |
| Loading required package: limma | |
| Attaching package: ‘limma’ | |
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| Loading required package: baySeq | |
| Loading required package: abind | |
| Attaching package: ‘baySeq’ | |
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| Loading required package: ROC | |
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| Loading required package: viridis | |
| Loading required package: viridisLite | |
| ====================== | |
| Welcome to heatmaply version 1.2.1 | |
| Type citation('heatmaply') for how to cite the package. | |
| Type ?heatmaply for the main documentation. | |
| The github page is: https://github.com/talgalili/heatmaply/ | |
| Please submit your suggestions and bug-reports at: https://github.com/talgalili/heatmaply/issues | |
| Or contact: <[email protected]> | |
| ====================== | |
| Attaching package: ‘heatmaply’ | |
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| normalize | |
| data.table 1.14.0 using 1 threads (see ?getDTthreads). Latest news: r-datatable.com | |
| ********** | |
| This installation of data.table has not detected OpenMP support. It should still work but in single-threaded mode. | |
| This is a Mac. Please read https://mac.r-project.org/openmp/. Please engage with Apple and ask them for support. Check r-datatable.com for updates, and our Mac instructions here: https://github.com/Rdatatable/data.table/wiki/Installation. After several years of many reports of installation problems on Mac, it's time to gingerly point out that there have been no similar problems on Windows or Linux. | |
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| Attaching package: ‘data.table’ | |
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| Listening on http://127.0.0.1:5737 |
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